Documentation and diversity analysis by DNA fingerprinting of the indigenous Mango (Mangifera indica L.) germplasm of West Bengal
Keywords:
DNA fingerprinting, Malda, mango, Murshidabad, pulp quality analysisAbstract
Mango (Mangifera indica L.) has been reported to have extensive diversity due to alloploidy, outbreeding, continuous grafting and phenotypic differences arising from varied agro climatic conditions in different mango growing regions. Characterization and documentation of local mangoes is important for identifying potential candidates for improved utilization of the genetic resource and future breeding. The districts of Murshidabad and Malda once famous for mango are now facing tremendous genetic erosion of the mango germplasm. More than 200 varieties of Mango were recorded during the time of the royals of these districts. This number has sharply declined in recent times. The traditional varieties are low yielding and are replaced by new high yielding hybrids. These varieties are also facing extinction because of the aggressive cultivation of Amrapali, Himsagar, Langra varieties of mango. Conservation of Mango (Mangifera indica L.) germplasm is of utmost importance. But for conservation extensive survey and proper documentation is necessary. This study is an attempt of the documentation of Mango varieties from Murshidabad and Maldah districts. The DNA fingerprinting data will also help in proper identification of mango varieties. The dendogram generated from the fingerprint show the genetic distance among the varieties. The mango germplasm diversity data generated will be important for future mango breeding and in implementing conservation strategies.
References
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Dash, R. C. and Hota, B. N. (1977). Some indigenous mango varieties of Orissa. Orissa J. Hort. 5: 35-52.
Díaz-Matallana M., Schuler-García I., Ruiz García M. and Hodson de Jaramillo, E. (2009). Analysis of diversity among six populations of Colombian mango (Mangifera indica L. cvar. Hilacha) using RAPDs markers. Electronic Journal of Biotechnology. 12: 1-8.
De, M., Das, J., Saha, M., Pal, A. and Dey, S. R. (2014). Documentation and Characterization of the Indigenous Mango (Mangifera indica L.) Varieties of Malda and Murshidabad District of West Bengal. J. Environ. Sociobiol. : 11(2) : 187-198.
Dinesh, M. R. and Vasugi, C. (2002). Catalogue of Mango Germplasm, IIHR, Bangalore. Pp. 160.
Gitahi, R., Remmy, K., Martina, K. and Katja, K. (2016). Diversity of threatened local mango landraces on smallholder farms in Eastern Kenya, Forests, Trees and Livelihoods. 25(4): 239-254.
Halder, N. C. (2017). Studies on ecological non-heterocrystous nitrogen fixing filamentous Cyanoprocaryota of specific Gangetic zone in West Bengal. International Journal of Experimental Research and Review (IJERR). 9: 70-76.
IPGRI (2006). Descriptors for mango (Mangifera indica). International Plant Genetic Resources Institute, Rome, Italy.
Karihaloo, J. L., Dwivedi, Y. K., Archak, S. and Gaikwad, A. B. (2003). Analysis of genetic diversity of Indian mango cultivars using RAPD markers. Journal of Horticultural Science & Biotechnology. 78: 285-289.
Krishna, H. and Singh, S. K. (2007). Biotechnological advances in mango (Mangifera indica L.) and their future implication in crop improvement: a review. Biotechnology Advances. 25(3): 223-243.
Majumder, D. N. (2013). Genetic Diversity in Mango (Mangifera Indica L.) through multivariate analysis. Bangladesh J. Agril. Res. 38(2): 343-353.
Mukharjee, S. K. (1953). The mango, its botany, cultivation, uses and future improvement. Economy Bot. 7: 130-162.
Pandit, S. S., Mitra, S., Giri, A. P., Pujari, K. H., Patil, B. P., Jambhale, N. D. and Gupta, V. S. (2007). Genetic diversity analysis of mango cultivars using inter simple sequence repeat markers. Current Science. 93: 1135- 41.
Pruthvish, R. and Chikkaswamy, B. K. (2016). Genetic Diversity and Relationships among Mango Varieties using RAPD Molecular Markers. Int. J. Curr. Microbiol. App. Sci. 5(1): 778-787.
Rajan, S., Negi, S. S. and Kumar, R. (1999). Catalogue of Mango Germplasm, Central Institute for Subtropical Horticulture, Lucknow.
Ramessur, A. D. and Ranghoo-Sanmukhiya, V. M. (2011). RAPD marker-assisted identification of genetic diversity among mango (Mangifera indica) varieties in Mauritius. Int. J. Agric. Biol. 13: 167– 173.
Ravishankar, K. V., Lalitha, A., Dinesh, M. R. and Anand, L. (2000). Assessment of genetic relatedness among mango cultivars of India using RAPD markers. J. Hortic. Sci. Biotechnol. 75(2): 198–201.
Schnell, R. J., Olano, C.T., Quintanilla, E. W. and Merrow, A. W. (2005). Isolation and characterization of 15 microsatellite loci from mango (Mangifera indica L.) and cross-species amplification in closely related taxa. Molecular Ecology Notes. 5: 625–627.
Schnell, R. J., Brown, J. S., Olano, C. T., Meerow, A. W., Campbell, R. J. and Kuhn, D. N. (2006). Mango genetic diversity analysis and pedigree inferences for Florida cultivars using microsatellite markers. Journal of the American Society for Horticultural Sciences. 131: 214-224.
Singh, N. P. (2012). Physico-chemical characterization of unexploited mango diversity in Sub-mountain zone of Northern India. Indian J. Plant Genet. Resour. 25(3): 261–269.
Subedi, A., Bajracharya, J., Joshi, B. K., Regmi, H. N., Gupta, S. R. and Hari, B. C. K. (2005a). Characterization and genetic diversity of mango (Mangifera indica L.) in Nepal. In: Sthapit BR, Upadhyay MP, Shrestha PK, Jarvis DI (eds.). On-farm conservation of agricultural biodiversity in Nepal. Volume I. Assessing the amount and distribution of genetic diversity on-farm. Proceedings of the Second National Workshop, 25- 27 Aug 2004, Nagarkot, Nepal. International Plant Genetic Resources Institute, Rome, Italy. pp. 167-175.
Subedi, A., Bajracharya, J., Joshi, B. K., Hari, B. C. K., Gupta, S. R., Regmi, H. N., Baral ,K. P., Shrestha, P., Thagunna, P., Tiwari, R. K. and Sthapit, B. R. (2005b). Ecogeographic survey of mango (Mangifera indica L.) genetic resources in Nepal. In: Sthapit BR, Upadhyay MP, Shrestha PK, Jarvis DI (eds.). On-farm conservation of agricultural biodiversity in Nepal. Volume I. Assessing the amount and distribution of genetic diversity on-farm. Proceedings of the Second National Workshop, 25-27 Aug 2004, Nagarkot, Nepal. International Plant Genetic Resources Institute, Rome, Italy. Pp. 167-175.
Tomar, R. S., Gajera, H. P., Viradiya, R., Patel, S. V. and Golakaya, B. A. (2011). Phylogenetic relationship among Mango Landraces of Saurastra based on DNA Fingerprinting. Journal of Horticulture and Forestry. 3(13): 379-385.
Vasugil, C. (2012). Genetic diversity in unique indigenous mango accessions (Appemidi) of the Western Ghats for certain fruit characteristic. Current Science. 103 (2): 199-207.
Yamanaka, N., Hasran, M., Xu, D. H., Tsunematsu, H., Idris, S. and Banet, T. (2006). Genetic relationship and diversity of four Mangifera species revealed through AFLP analysis. Genetic Resources and Crop Evolution. 53: 949-954.
Yonemori, K., Honsho, C., Kanzaki, S., Eiadthong, W., Sugiura, A. (2002). Phylogenetic relationships of Mangifera species revealed by ITS sequences of nuclear ribosomal DNA and a possibility of their hybrid origin. Plant System. Evol. 231: 59–75.
Dash, R. C. and Hota, B. N. (1977). Some indigenous mango varieties of Orissa. Orissa J. Hort. 5: 35-52.
Díaz-Matallana M., Schuler-García I., Ruiz García M. and Hodson de Jaramillo, E. (2009). Analysis of diversity among six populations of Colombian mango (Mangifera indica L. cvar. Hilacha) using RAPDs markers. Electronic Journal of Biotechnology. 12: 1-8.
De, M., Das, J., Saha, M., Pal, A. and Dey, S. R. (2014). Documentation and Characterization of the Indigenous Mango (Mangifera indica L.) Varieties of Malda and Murshidabad District of West Bengal. J. Environ. Sociobiol. : 11(2) : 187-198.
Dinesh, M. R. and Vasugi, C. (2002). Catalogue of Mango Germplasm, IIHR, Bangalore. Pp. 160.
Gitahi, R., Remmy, K., Martina, K. and Katja, K. (2016). Diversity of threatened local mango landraces on smallholder farms in Eastern Kenya, Forests, Trees and Livelihoods. 25(4): 239-254.
Halder, N. C. (2017). Studies on ecological non-heterocrystous nitrogen fixing filamentous Cyanoprocaryota of specific Gangetic zone in West Bengal. International Journal of Experimental Research and Review (IJERR). 9: 70-76.
IPGRI (2006). Descriptors for mango (Mangifera indica). International Plant Genetic Resources Institute, Rome, Italy.
Karihaloo, J. L., Dwivedi, Y. K., Archak, S. and Gaikwad, A. B. (2003). Analysis of genetic diversity of Indian mango cultivars using RAPD markers. Journal of Horticultural Science & Biotechnology. 78: 285-289.
Krishna, H. and Singh, S. K. (2007). Biotechnological advances in mango (Mangifera indica L.) and their future implication in crop improvement: a review. Biotechnology Advances. 25(3): 223-243.
Majumder, D. N. (2013). Genetic Diversity in Mango (Mangifera Indica L.) through multivariate analysis. Bangladesh J. Agril. Res. 38(2): 343-353.
Mukharjee, S. K. (1953). The mango, its botany, cultivation, uses and future improvement. Economy Bot. 7: 130-162.
Pandit, S. S., Mitra, S., Giri, A. P., Pujari, K. H., Patil, B. P., Jambhale, N. D. and Gupta, V. S. (2007). Genetic diversity analysis of mango cultivars using inter simple sequence repeat markers. Current Science. 93: 1135- 41.
Pruthvish, R. and Chikkaswamy, B. K. (2016). Genetic Diversity and Relationships among Mango Varieties using RAPD Molecular Markers. Int. J. Curr. Microbiol. App. Sci. 5(1): 778-787.
Rajan, S., Negi, S. S. and Kumar, R. (1999). Catalogue of Mango Germplasm, Central Institute for Subtropical Horticulture, Lucknow.
Ramessur, A. D. and Ranghoo-Sanmukhiya, V. M. (2011). RAPD marker-assisted identification of genetic diversity among mango (Mangifera indica) varieties in Mauritius. Int. J. Agric. Biol. 13: 167– 173.
Ravishankar, K. V., Lalitha, A., Dinesh, M. R. and Anand, L. (2000). Assessment of genetic relatedness among mango cultivars of India using RAPD markers. J. Hortic. Sci. Biotechnol. 75(2): 198–201.
Schnell, R. J., Olano, C.T., Quintanilla, E. W. and Merrow, A. W. (2005). Isolation and characterization of 15 microsatellite loci from mango (Mangifera indica L.) and cross-species amplification in closely related taxa. Molecular Ecology Notes. 5: 625–627.
Schnell, R. J., Brown, J. S., Olano, C. T., Meerow, A. W., Campbell, R. J. and Kuhn, D. N. (2006). Mango genetic diversity analysis and pedigree inferences for Florida cultivars using microsatellite markers. Journal of the American Society for Horticultural Sciences. 131: 214-224.
Singh, N. P. (2012). Physico-chemical characterization of unexploited mango diversity in Sub-mountain zone of Northern India. Indian J. Plant Genet. Resour. 25(3): 261–269.
Subedi, A., Bajracharya, J., Joshi, B. K., Regmi, H. N., Gupta, S. R. and Hari, B. C. K. (2005a). Characterization and genetic diversity of mango (Mangifera indica L.) in Nepal. In: Sthapit BR, Upadhyay MP, Shrestha PK, Jarvis DI (eds.). On-farm conservation of agricultural biodiversity in Nepal. Volume I. Assessing the amount and distribution of genetic diversity on-farm. Proceedings of the Second National Workshop, 25- 27 Aug 2004, Nagarkot, Nepal. International Plant Genetic Resources Institute, Rome, Italy. pp. 167-175.
Subedi, A., Bajracharya, J., Joshi, B. K., Hari, B. C. K., Gupta, S. R., Regmi, H. N., Baral ,K. P., Shrestha, P., Thagunna, P., Tiwari, R. K. and Sthapit, B. R. (2005b). Ecogeographic survey of mango (Mangifera indica L.) genetic resources in Nepal. In: Sthapit BR, Upadhyay MP, Shrestha PK, Jarvis DI (eds.). On-farm conservation of agricultural biodiversity in Nepal. Volume I. Assessing the amount and distribution of genetic diversity on-farm. Proceedings of the Second National Workshop, 25-27 Aug 2004, Nagarkot, Nepal. International Plant Genetic Resources Institute, Rome, Italy. Pp. 167-175.
Tomar, R. S., Gajera, H. P., Viradiya, R., Patel, S. V. and Golakaya, B. A. (2011). Phylogenetic relationship among Mango Landraces of Saurastra based on DNA Fingerprinting. Journal of Horticulture and Forestry. 3(13): 379-385.
Vasugil, C. (2012). Genetic diversity in unique indigenous mango accessions (Appemidi) of the Western Ghats for certain fruit characteristic. Current Science. 103 (2): 199-207.
Yamanaka, N., Hasran, M., Xu, D. H., Tsunematsu, H., Idris, S. and Banet, T. (2006). Genetic relationship and diversity of four Mangifera species revealed through AFLP analysis. Genetic Resources and Crop Evolution. 53: 949-954.
Yonemori, K., Honsho, C., Kanzaki, S., Eiadthong, W., Sugiura, A. (2002). Phylogenetic relationships of Mangifera species revealed by ITS sequences of nuclear ribosomal DNA and a possibility of their hybrid origin. Plant System. Evol. 231: 59–75.
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Published
2017-06-30
How to Cite
Pal, A., Bandyopadhyay, B., Dey, S. R., Ganguli, S., Singh, P. K., & De, M. (2017). Documentation and diversity analysis by DNA fingerprinting of the indigenous Mango (Mangifera indica L.) germplasm of West Bengal. International Journal of Experimental Research and Review, 11, 21–34. Retrieved from https://qtanalytics.in/journals/index.php/IJERR/article/view/1272
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